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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYV1_TETNGAlkB homolog 4, lysine demthylase. (257 aa)    
Predicted Functional Partners:
H3CW38_TETNG
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.903
H3D4Q0_TETNG
Ring finger protein 41.
    
  0.903
H3CPY5_TETNG
Rap guanine nucleotide exchange factor (GEF) 1b.
     
  0.900
H3CY46_TETNG
Uncharacterized protein.
     
  0.900
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
     
  0.900
H3DPH8_TETNG
Tyrosine-protein kinase receptor.
     
  0.900
H3CZC1_TETNG
SH3-domain GRB2-like 1b.
     
  0.800
H3DD07_TETNG
SH3-domain GRB2-like 1a.
     
  0.800
DOHH
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
    0.645
H3DIA9_TETNG
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.625
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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