Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSD2Fibronectin type III and SPRY domain containing 2. (546 aa)    
Predicted Functional Partners:
H3CAJ6_TETNG
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 
 0.900
H3CFV0_TETNG
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 
 0.900
H3C443_TETNG
RING-type domain-containing protein.
      
 0.686
H3DM40_TETNG
Speriolin_C domain-containing protein.
    
  0.638
H3D3G8_TETNG
Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family.
    
   0.617
H3DJ36_TETNG
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
      
 0.614
H3DJD0_TETNG
Kelch repeat and BTB (POZ) domain containing 11.
      
 0.574
H3CYG5_TETNG
Hyaluronan and proteoglycan link protein 3.
      
 0.509
H3D5T8_TETNG
Neuralized E3 ubiquitin protein ligase 2.
      
 0.509
TRIM67
Tripartite motif containing 67.
     
 0.475
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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