Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
H3BYY9_TETNGUncharacterized protein. (817 aa)    
Predicted Functional Partners:
H3D6E2_TETNG
MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).
    
   0.919
H3DGC2_TETNG
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
      
 0.754
H3CYD4_TETNG
Zinc finger, RAN-binding domain containing 3.
      
 0.686
H3C2G7_TETNG
Tower domain-containing protein.
      
 0.678
H3D8F0_TETNG
DNA replication helicase/nuclease 2.
      
 0.646
H3CN59_TETNG
F-box DNA helicase 1.
      
 0.628
H3DPE0_TETNG
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
      
 0.619
H3CFH1_TETNG
Exonuclease 1.
      
 0.602
H3DAV5_TETNG
FA complementation group D2.
      
 0.591
H3CP62_TETNG
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.571
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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