Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BZ20_TETNGVacuolar protein sorting 13 homolog A. (3383 aa)    
Predicted Functional Partners:
H3CHD5_TETNG
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.707
H3CGB8_TETNG
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
    
   0.646
H3C550_TETNG
Synaptojanin 1.
   
 
 0.631
H3CGG1_TETNG
Uncharacterized protein.
    
   0.609
H3DL37_TETNG
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
      
 0.590
H3CAS0_TETNG
SPG11 vesicle trafficking associated, spatacsin.
   
  
 0.559
H3DNC9_TETNG
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
  
 0.541
H3CZY4_TETNG
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.528
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.521
H3CYV2_TETNG
VPS39 subunit of HOPS complex.
   
 
 0.507
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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