Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASSF5Ras association domain family member 5. (264 aa)    
Predicted Functional Partners:
STK4
Serine/threonine kinase 4.
    
 0.914
H3CUS0_TETNG
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.914
H3DB34_TETNG
Ras association domain family member 1.
    
 
 0.895
RASSF1
Ras association domain family member 1.
    
 
 0.895
H3DPT6_TETNG
Salvador family WW domain containing protein 1.
    
 
 0.802
H3C4Q1_TETNG
Uncharacterized protein.
    
 
 0.744
Q4RQE7_TETNG
Chromosome 17 SCAF15006, whole genome shotgun sequence.
    
 
 0.744
H3DH21_TETNG
Ras association domain family member 2a.
    
 
 0.744
H3C082_TETNG
RAB interacting factor.
    
 
 0.688
H3C9Q4_TETNG
Zgc:55558.
    
 
 0.649
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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