Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMURF1E3 ubiquitin-protein ligase. (744 aa)    
Predicted Functional Partners:
H3BXZ7_TETNG
Uncharacterized protein.
 
 
 0.885
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.813
H3DN47_TETNG
Mothers against decapentaplegic homolog.
    
 0.806
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.788
H3CSN3_TETNG
SMAD family member 6.
    
 0.781
H3CVY4_TETNG
Mothers against decapentaplegic homolog.
    
 0.781
Q4T7H2_TETNG
Mothers against decapentaplegic homolog.
    
 0.687
H3CX32_TETNG
Mothers against decapentaplegic homolog.
    
 0.679
H3DK24_TETNG
Mothers against decapentaplegic homolog.
    
 0.679
H3CB89_TETNG
Pleckstrin homology domain containing, family O member 1b.
    
 
 0.667
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.