Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZ63_TETNGDENN/MADD domain containing 5A. (1138 aa)    
Predicted Functional Partners:
RAB28
RAB28, member RAS oncogene family.
     
 0.711
H3CW31_TETNG
MAP-kinase activating death domain.
    
 
 0.648
H3CTE3_TETNG
Zgc:171482.
   
  
 0.624
H3DNE9_TETNG
Zinc finger, matrin-type 4b.
   
  
 0.624
H3CTF9_TETNG
AVL9 homolog (S. cerevisiase).
      
 0.620
H3D8X5_TETNG
EGF-like-domain, multiple 6.
      
 0.608
H3CAQ5_TETNG
Matrin-type domain-containing protein.
   
  
 0.581
Q4S8G0_TETNG
Chromosome undetermined SCAF14706, whole genome shotgun sequence.
      
 0.580
H3D2W0_TETNG
Integrin alpha FG-GAP repeat containing 1.
      
 0.580
H3D7A4_TETNG
Solute carrier family 24 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.576
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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