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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZ67_TETNGZinc finger protein 408. (370 aa)    
Predicted Functional Partners:
H3CWA0_TETNG
Uncharacterized protein.
   
    0.908
H3CWA1_TETNG
G patch domain containing 3.
   
    0.908
H3D151_TETNG
RING-type domain-containing protein.
   
    0.680
H3DEN0_TETNG
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
   
 
 0.622
H3DCG9_TETNG
Sterile alpha motif domain containing 11.
    
 
 0.600
H3D1Y4_TETNG
Norrin cystine knot growth factor NDP.
    
 
 0.556
H3CNY4_TETNG
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.465
H3DK97_TETNG
Acyl-CoA thioesterase 13.
      
 0.463
H3CIC3_TETNG
BTB (POZ) domain containing 9.
      
 0.459
H3CEF9_TETNG
Cyclin J; Belongs to the cyclin family.
    
 0.447
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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