Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BZ80_TETNGUrocanate hydratase 1. (701 aa)    
Predicted Functional Partners:
H3DF09_TETNG
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
 
 0.988
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.829
H3CMP3_TETNG
Formimidoyltransferase cyclodeaminase.
  
  
 0.764
H3CEU4_TETNG
B cell receptor associated protein 31.
      
 0.686
H3CWM0_TETNG
Myeloid-associated differentiation marker-like 2.
      
 0.633
H3CS27_TETNG
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
      
 0.630
H3D4F6_TETNG
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
   
  
 0.594
Q4SCR6_TETNG
Chromosome 7 SCAF14650, whole genome shotgun sequence.
      
 0.540
H3CDV1_TETNG
WD repeat domain 5.
    
 0.525
H3CUG5_TETNG
Uncharacterized protein.
    
 0.523
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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