Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BZ87_TETNGSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (734 aa)    
Predicted Functional Partners:
H3C1Q6_TETNG
Neuropilin; Belongs to the neuropilin family.
    
 
 0.797
H3CTI6_TETNG
Neuropilin; Belongs to the neuropilin family.
    
 0.748
H3CH17_TETNG
Si:dkey-49n23.1; Belongs to the semaphorin family.
    
   0.608
H3CPF7_TETNG
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family.
    
   0.608
H3DB93_TETNG
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.
    
   0.608
H3DPE9_TETNG
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family.
    
   0.608
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.521
H3CE12_TETNG
Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.
      
 0.509
H3CTY8_TETNG
Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.
      
 0.508
H3DK74_TETNG
Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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