Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Q4SIW6_TETNGChromosome 21 SCAF14577, whole genome shotgun sequence. (375 aa)    
Predicted Functional Partners:
H3DC61_TETNG
Major facilitator superfamily domain containing 5.
      
 0.564
H3D5G4_TETNG
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.505
H3CUB2_TETNG
Unc-5 netrin receptor A.
    
 
 0.499
H3C8B2_TETNG
HOP homeobox.
      
 0.472
H3D7G2_TETNG
Unc-5 netrin receptor Da.
    
 
 0.472
H3DHU8_TETNG
Peptidylprolyl isomerase.
      
 0.469
H3CB60_TETNG
SPRY domain containing 3.
      
 0.451
SPRYD3
SPRY domain containing 3.
      
 0.451
H3DQ60_TETNG
Stanniocalcin 1.
      
 0.429
H3C223_TETNG
Metaxin 2.
      
 0.404
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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