Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZA3_TETNGEstrogen-related receptor gamma b. (262 aa)    
Predicted Functional Partners:
H3C8P2_TETNG
RRM domain-containing protein.
   
 0.607
H3D182_TETNG
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
 0.607
H3C131_TETNG
Sprouty related EVH1 domain containing 3.
      
 0.543
H3CBC8_TETNG
Heat shock transcription factor 4.
      
 0.543
Q4RRB4_TETNG
Chromosome 14 SCAF15003, whole genome shotgun sequence.
 
     0.513
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.511
H3CFE0_TETNG
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.505
H3CDB0_TETNG
Nuclear receptor corepressor 2.
    
 0.432
H3CSZ3_TETNG
Nuclear receptor corepressor 1.
    
 0.432
H3DQN4_TETNG
Uncharacterized protein.
    
 0.432
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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