Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BZB0_TETNGANK_REP_REGION domain-containing protein. (1563 aa)    
Predicted Functional Partners:
H3DCB0_TETNG
Rho family GTPase 1b.
    
 0.719
H3C8X1_TETNG
EXS domain-containing protein.
   
 
 0.666
H3CNZ4_TETNG
Xenotropic and polytropic retrovirus receptor 1b.
   
 
 0.666
H3DDI1_TETNG
Xenotropic and polytropic retrovirus receptor 1a.
   
 
 0.666
CRK
CRK proto-oncogene, adaptor protein.
    
 0.598
H3CKX2_TETNG
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.598
H3D9W3_TETNG
Uncharacterized protein.
    
 0.598
H3CCZ0_TETNG
Peptidylprolyl isomerase.
   
 0.534
H3CYD2_TETNG
Rho family GTPase 3a.
    
 0.534
H3DIV2_TETNG
Inhibitor of DNA binding 2a.
      
 0.509
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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