STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZB5_TETNGUncharacterized protein. (137 aa)    
Predicted Functional Partners:
H3CVV4_TETNG
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.897
H3CH30_TETNG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.857
H3D0S7_TETNG
Transcription elongation factor SPT5.
   
 0.852
Q4SK90_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
    
 0.849
Q4SCJ6_TETNG
Chromosome undetermined SCAF14653, whole genome shotgun sequence.
    
 0.849
H3D0V9_TETNG
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.849
POLR2E
Chromosome 1 SCAF14751, whole genome shotgun sequence.
    
 0.849
Q4S925_TETNG
Chromosome undetermined SCAF14702, whole genome shotgun sequence; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.848
Q4TAB3_TETNG
Chromosome undetermined SCAF7390, whole genome shotgun sequence.
    
 0.847
Q4S7A1_TETNG
Chromosome 1 SCAF14716, whole genome shotgun sequence.
    
 0.847
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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