Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZB8_TETNGCentromere protein K. (123 aa)    
Predicted Functional Partners:
H3BWS4_TETNG
Proliferation associated nuclear element.
   
 0.998
H3C3B4_TETNG
Centromere protein N.
   
 0.998
Q4SHZ5_TETNG
Chromosome 5 SCAF14581, whole genome shotgun sequence.
   
 0.992
H3C3F9_TETNG
Uncharacterized protein.
   
 0.988
H3C6W0_TETNG
Centromere protein I.
   
 0.988
H3D034_TETNG
Uncharacterized protein.
   
 
 0.973
H3DBA2_TETNG
Centromere protein S.
   
 0.903
Q4RVM6_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
   
 0.903
Q4RUR4_TETNG
Chromosome 12 SCAF14993, whole genome shotgun sequence.
   
  0.898
H3C1N1_TETNG
Uncharacterized protein.
   
 0.846
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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