close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZC5_TETNGFERM domain-containing protein. (405 aa)    
Predicted Functional Partners:
H3CHP1_TETNG
Talin 1.
 
     0.837
H3CY80_TETNG
Vinculin b.
   
 0.774
H3DGK0_TETNG
Vinculin a.
   
 0.774
H3D1V2_TETNG
Integrin beta; Belongs to the integrin beta chain family.
   
 0.616
H3CVR4_TETNG
Integrin beta; Belongs to the integrin beta chain family.
   
 0.584
H3C470_TETNG
Integrin beta.
   
 0.577
H3DQE2_TETNG
Integrin beta; Belongs to the integrin beta chain family.
   
 0.577
H3CBU6_TETNG
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.574
CTNNA2
Catenin alpha 2.
   
 0.574
H3CNU6_TETNG
Catenin (cadherin-associated protein), alpha 2.
   
 0.574
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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