Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZD9_TETNGHistone H2A; Belongs to the histone H2A family. (130 aa)    
Predicted Functional Partners:
H3CL24_TETNG
Myb-like, SWIRM and MPN domains 1.
    
 0.842
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.804
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
   
 0.784
H3CSV0_TETNG
Histone H2B; Belongs to the histone H2B family.
  
 0.737
Q4SKJ4_TETNG
Histone H2B; Belongs to the histone H2B family.
  
 0.735
H3C993_TETNG
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.734
H3CDR5_TETNG
Histone H2B; Belongs to the histone H2B family.
  
 0.734
Q4SL95_TETNG
Histone H2B; Belongs to the histone H2B family.
  
 0.734
Q4SJC2_TETNG
Chromosome 4 SCAF14575, whole genome shotgun sequence; Belongs to the histone H2B family.
  
 0.733
Q4SKJ9_TETNG
Histone H2B; Belongs to the histone H2B family.
  
 0.730
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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