Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BZE1_TETNGDUF4392 domain-containing protein. (284 aa)    
Predicted Functional Partners:
H3DQP3_TETNG
DUF4392 domain-containing protein.
 
     0.938
H3C369_TETNG
Family with sequence similarity 167 member Ab.
      
 0.686
mrpl33
39S ribosomal protein L33, mitochondrial; Belongs to the bacterial ribosomal protein bL33 family.
      
 0.603
H3DFI1_TETNG
Junctional adhesion molecule 3a.
    
 
 0.591
H3CH45_TETNG
Alcohol dehydrogenase iron containing 1.
      
 0.509
H3DAM6_TETNG
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.475
H3DE04_TETNG
Intraflagellar transport 88 homolog.
    
 0.475
H3CMC2_TETNG
MAPK interacting serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.472
H3CXS9_TETNG
MAPK interacting serine/threonine kinase 2b; Belongs to the protein kinase superfamily.
      
 0.472
SH3PXD2A
SH3 and PX domains 2A.
      
 0.456
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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