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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZE8_TETNGSynaptojanin 2 binding protein. (143 aa)    
Predicted Functional Partners:
Q4SYG7_TETNG
Chromosome undetermined SCAF12065, whole genome shotgun sequence.
    
 0.749
H3DGU3_TETNG
Ribosome binding protein 1a.
    
 0.591
H3CYW3_TETNG
WD repeat domain 32.
      
 0.553
H3CI78_TETNG
Zgc:153240.
      
 0.552
CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
      
 0.545
SLCO5A1
Solute carrier organic anion transporter family member.
    
   0.531
H3CRD4_TETNG
Solute carrier organic anion transporter family member.
    
   0.531
ATAD3A
ATPase family AAA domain containing 3A.
   
 
 0.526
H3CQI9_TETNG
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.523
H3CM13_TETNG
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.511
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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