STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZF1_TETNGSi:dkey-222n6.2; Belongs to the intermediate filament family. (383 aa)    
Predicted Functional Partners:
H3D6D1_TETNG
BCL2 associated athanogene 3.
    
 0.533
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.506
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.479
H3CGU7_TETNG
HECT domain-containing protein.
     
 0.435
H3CSW1_TETNG
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.419
H3DF20_TETNG
Heat shock protein 90, beta (grp94), member 1.
    
 0.417
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.413
H3C4P7_TETNG
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.409
H3CII4_TETNG
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.409
H3CWQ3_TETNG
Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.409
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.