Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3BZG1_TETNGCUT domain-containing protein. (82 aa)    
Predicted Functional Partners:
H3DFM4_TETNG
HNF1 homeobox Ba.
     
 0.419
H3CP78_TETNG
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.418
H3DA76_TETNG
LIM homeobox 1a.
   
 
 0.418
H3C8A9_TETNG
Origin recognition complex, subunit 3.
    
   0.413
H3D6D4_TETNG
Atonal bHLH transcription factor 7.
      
 0.403
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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