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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2LSECIS binding protein 2 like. (1026 aa)    
Predicted Functional Partners:
H3DN28_TETNG
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.861
H3CC35_TETNG
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
    
 0.697
H3DBQ1_TETNG
Uncharacterized protein; Belongs to the calreticulin family.
   
 0.682
H3DDG9_TETNG
Calreticulin.
   
 0.682
H3CXX9_TETNG
G protein pathway suppressor 1.
   
 0.681
H3CFW6_TETNG
Dihydrolipoyl dehydrogenase.
  
 0.626
Q4T379_TETNG
Chromosome 21 SCAF10109, whole genome shotgun sequence.
  
 0.626
H3CPJ1_TETNG
Thioredoxin reductase 3.
  
 0.614
H3DH84_TETNG
Thioredoxin reductase 2, tandem duplicate 1; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.599
H3D499_TETNG
Microsomal triglyceride transfer protein.
    
 0.597
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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