Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C4G8_TETNGUSP domain-containing protein; Belongs to the peptidase C19 family. (158 aa)    
Predicted Functional Partners:
H3CR53_TETNG
WD repeat domain 48b.
    
 0.832
H3DD39_TETNG
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.608
DMWD
DM1 locus, WD repeat containing.
   
 0.595
H3D070_TETNG
WD repeat domain 20b.
   
 0.595
H3DIP6_TETNG
WD repeat domain 20a.
   
 0.595
H3DAV5_TETNG
FA complementation group D2.
    
 0.586
H3DIS1_TETNG
Uncharacterized protein.
     
 0.567
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.515
H3D3N5_TETNG
FA complementation group I.
   
 0.511
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.507
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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