Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZJ8_TETNGPatched domain containing 4. (299 aa)    
Predicted Functional Partners:
H3DPD2_TETNG
Patched domain containing 4.
 
      0.899
H3BXR2_TETNG
WD_REPEATS_REGION domain-containing protein.
      
 0.538
H3DPD0_TETNG
Opsin 5; Belongs to the G-protein coupled receptor 1 family.
      
 0.517
H3DPD1_TETNG
Opsin 5; Belongs to the G-protein coupled receptor 1 family.
      
 0.517
H3DEK8_TETNG
FIC domain containing.
      
 0.508
H3CAT9_TETNG
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.497
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
      
 0.496
H3CT38_TETNG
Receptor-interacting serine-threonine kinase 4.
    
 
 0.459
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.425
H3CG35_TETNG
Kelch-like family member 15.
      
 0.415
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.