STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZL6_TETNGCryptochrome circadian regulator 5. (525 aa)    
Predicted Functional Partners:
H3DLL5_TETNG
Timeless circadian clock.
    
 0.757
H3CP18_TETNG
Period circadian clock 1b.
   
 0.702
PER2
Period circadian regulator 2.
   
 0.687
H3DCQ3_TETNG
Period circadian clock 2.
   
 0.687
H3C2T2_TETNG
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.613
H3CAZ8_TETNG
Uncharacterized protein.
   
 0.579
H3D3L8_TETNG
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.579
H3D2N8_TETNG
Neuronal PAS domain protein 2.
    
 0.554
H3DQ05_TETNG
F-box and leucine-rich repeat protein 15.
    
 0.545
H3CP94_TETNG
Period circadian clock 3.
   
 0.535
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.