Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZL9_TETNGNeurite extension and migration factor b. (1272 aa)    
Predicted Functional Partners:
H3CU76_TETNG
Ring finger protein, LIM domain interacting.
      
 0.686
CCDC112
Coiled-coil domain containing 112.
      
 0.597
H3DJR7_TETNG
COP1 E3 ubiquitin ligase.
      
 0.582
H3D8C2_TETNG
Epoxide hydrolase 4.
      
 0.578
H3C411_TETNG
Dharma.
      
 0.545
H3DFF1_TETNG
Methyltransferase like 27.
      
 0.508
H3BW80_TETNG
Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine).
      
 0.472
H3BZK7_TETNG
Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine).
      
 0.472
Q4RTA0_TETNG
Chromosome 1 SCAF14998, whole genome shotgun sequence.
      
 0.467
H3C1T5_TETNG
Si:dkey-163m14.2.
      
 0.461
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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