Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZN4_TETNGHeterogeneous nuclear ribonucleoprotein K. (484 aa)    
Predicted Functional Partners:
H3DDK8_TETNG
Heterogeneous nuclear ribonucleoprotein M.
   
 0.980
H3C1F2_TETNG
Heterogeneous nuclear ribonucleoprotein L.
   
 0.931
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.931
H3CSC5_TETNG
Interleukin enhancer binding factor 3b.
   
 
 0.929
H3C5Q4_TETNG
RRM domain-containing protein.
   
 0.925
H3CPQ0_TETNG
RRM domain-containing protein.
   
 0.925
H3CXQ0_TETNG
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 
 0.924
H3C087_TETNG
Cold inducible RNA binding protein b.
   
 0.923
H3D282_TETNG
RNA binding motif protein 42.
    
 
 0.919
H3C8R3_TETNG
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.913
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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