Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BZR2_TETNGCalcium homeostasis endoplasmic reticulum protein. (899 aa)    
Predicted Functional Partners:
H3D5F1_TETNG
U2 snRNP-associated SURP domain containing.
   
 0.985
H3C0P7_TETNG
RNA binding motif protein 17.
   
 0.960
H3DCY8_TETNG
Splicing factor 3a, subunit 2.
   
 0.950
DHX15
DEAH-box helicase 15.
   
 0.937
H3CUT3_TETNG
Splicing factor 3b, subunit 4.
   
 0.903
H3C896_TETNG
Splicing factor 3a, subunit 1.
   
 0.893
Q4SQY6_TETNG
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.879
H3D5X9_TETNG
PHD finger protein 5A.
   
 0.830
H3DNJ6_TETNG
FRA10A associated CGG repeat 1.
    
 
 0.827
H3CRP7_TETNG
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.826
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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