STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZS2_TETNGCD109 molecule. (1430 aa)    
Predicted Functional Partners:
H3DLB6_TETNG
Ring finger protein 2.
    
 0.634
PSPN
Persephin.
      
 0.609
Q4RD68_TETNG
Chromosome undetermined SCAF17299, whole genome shotgun sequence.
    
 
 0.605
H3CG81_TETNG
Chromobox homolog 8b.
    
 0.552
H3DKW1_TETNG
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.552
H3DFS6_TETNG
Dachsous cadherin-related 1a.
     
 0.551
H3CXT8_TETNG
Crumbs cell polarity complex component 1.
     
 0.538
H3CRT3_TETNG
Bmi1 polycomb ring finger oncogene 1a.
    
 0.535
PCGF2
Polycomb group ring finger 2.
    
 0.535
H3C730_TETNG
Embryonic ectoderm development.
    
 0.507
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.