Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BZS3_TETNGHyaluronan and proteoglycan link protein 1a. (314 aa)    
Predicted Functional Partners:
H3C5H2_TETNG
Aggrecan a.
   
 0.664
H3CYG6_TETNG
Aggrecan b.
   
 0.664
H3CK48_TETNG
Zinc finger protein.
    
 0.465
H3BY37_TETNG
Tenascin C.
   
 0.460
H3C1G4_TETNG
Lumican.
    
 0.454
H3D7G9_TETNG
Zmp:0000000846.
   
 0.453
H3CCV0_TETNG
Hyaluronan synthase 1.
   
 
 0.421
H3DDB2_TETNG
EGF-like repeats and discoidin I-like domains 3a.
   
 0.409
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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