Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BZS4_TETNGUncharacterized protein. (123 aa)    
Predicted Functional Partners:
H3CAM9_TETNG
Pyridine nucleotide-disulphide oxidoreductase domain 1.
 
     0.946
H3CU74_TETNG
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
   
   0.909
RTCB
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
   
 
 0.856
H3D8D1_TETNG
Smx5.
    
   0.748
H3DLL3_TETNG
Sulfite oxidase.
   
 0.662
H3CCM7_TETNG
Mitochondrial ribosomal protein S35.
   
 
 0.657
H3CP62_TETNG
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
     
 0.592
H3CV89_TETNG
Glucose-fructose oxidoreductase domain containing 2.
     
 0.586
H3DIR6_TETNG
GFO_IDH_MocA domain-containing protein.
     
 0.586
H3CCK3_TETNG
Zgc:92275.
  
 
 0.565
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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