close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZT4_TETNGPDZ and LIM domain 7. (462 aa)    
Predicted Functional Partners:
H3CNN3_TETNG
Sp7 transcription factor.
    
 
 0.784
H3CJ55_TETNG
Heart and neural crest derivatives expressed 2.
      
 0.741
H3CB75_TETNG
Nuclear factor of activated T cells 1.
      
 0.586
H3CUB5_TETNG
HIG1 hypoxia inducible domain family, member 2A.
      
 0.585
H3CJ84_TETNG
Synuclein, beta; Belongs to the synuclein family.
      
 0.491
H3DA70_TETNG
T-box transcription factor 4.
   
 
 0.491
Q4SK83_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
   
 0.488
H3CY80_TETNG
Vinculin b.
   
 0.488
H3DEW4_TETNG
Parvin, beta.
   
 0.488
H3DEW5_TETNG
Parvin, gamma.
   
 0.488
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.