Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1QCComplement C1q C chain. (248 aa)    
Predicted Functional Partners:
C1QA
Complement C1q A chain.
   
 0.934
H3DAP4_TETNG
Low density lipoprotein receptor-related protein 1Aa.
     
  0.900
H3DBQ1_TETNG
Uncharacterized protein; Belongs to the calreticulin family.
     
  0.900
H3DC65_TETNG
Low density lipoprotein receptor-related protein 1Ab.
     
  0.900
H3DDG9_TETNG
Calreticulin.
     
  0.900
H3CRS7_TETNG
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.757
Q4SNE7_TETNG
Chromosome 8 SCAF14543, whole genome shotgun sequence; Belongs to the peptidase S1 family.
   
 0.625
H3CRH4_TETNG
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.625
H3D0U6_TETNG
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
   
 0.625
H3D0U8_TETNG
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.625
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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