STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BZY1_TETNGRAD54 homolog B. (566 aa)    
Predicted Functional Partners:
H3DIS1_TETNG
Uncharacterized protein.
   
 0.815
Q4RXV2_TETNG
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.812
H3DD39_TETNG
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.811
H3DAW2_TETNG
RAD18 E3 ubiquitin protein ligase.
   
 0.790
H3DDM5_TETNG
Actin-like 6A; Belongs to the actin family.
   
 0.790
H3CSW1_TETNG
Ubiquitin-conjugating enzyme E2 variant 2.
    
 0.765
H3D379_TETNG
Actin related protein 5; Belongs to the actin family.
    
 0.752
H3CFH1_TETNG
Exonuclease 1.
   
 0.710
H3DIZ0_TETNG
INO80 complex subunit C.
    
 0.708
H3CLE6_TETNG
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.668
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.