Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C027_TETNGSi:dkey-222f2.1; Belongs to the intermediate filament family. (402 aa)    
Predicted Functional Partners:
H3CUH4_TETNG
Mothers against decapentaplegic homolog.
    
  0.925
H3D1J5_TETNG
Mothers against decapentaplegic homolog.
    
  0.925
H3C1K9_TETNG
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
    
  0.902
H3DBV4_TETNG
Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.
    
  0.902
H3DLL8_TETNG
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
    
  0.902
H3BWW8_TETNG
SNAP associated protein.
     
  0.900
H3CL15_TETNG
Cyclin E1; Belongs to the cyclin family.
     
  0.900
H3CTS4_TETNG
Cyclin D2, a; Belongs to the cyclin family.
     
  0.900
H3CTS9_TETNG
E2F transcription factor 4.
     
  0.900
Q4SIM8_TETNG
Chromosome 21 SCAF14577, whole genome shotgun sequence.
     
  0.900
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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