STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C027_TETNGSi:dkey-222f2.1; Belongs to the intermediate filament family. (402 aa)    
Predicted Functional Partners:
H3CUH4_TETNG
Mothers against decapentaplegic homolog.
   
  0.925
H3BWW8_TETNG
SNAP associated protein.
     
  0.900
H3CL15_TETNG
Cyclin E1; Belongs to the cyclin family.
     
  0.900
H3CTS4_TETNG
Cyclin D2, a; Belongs to the cyclin family.
     
  0.900
Q4SIM8_TETNG
Chromosome 21 SCAF14577, whole genome shotgun sequence.
     
  0.900
Q4SAA8_TETNG
Chromosome 19 SCAF14691, whole genome shotgun sequence; Belongs to the cyclin family.
     
  0.900
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.900
H3D610_TETNG
Cyclin E2; Belongs to the cyclin family.
     
  0.900
Q4RZE5_TETNG
Chromosome undetermined SCAF14936, whole genome shotgun sequence; Belongs to the cyclin family.
     
  0.900
H3DBR9_TETNG
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.900
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.