Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C033_TETNGPaired domain-containing protein. (202 aa)    
Predicted Functional Partners:
H3CHD8_TETNG
Mesenchyme homeobox 2b.
    
 
 0.729
H3D094_TETNG
Muscle segment homeobox 1a.
    
 
 0.645
H3CHI0_TETNG
Glial cells missing transcription factor 2.
      
 0.615
H3DI33_TETNG
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.575
H3DHR4_TETNG
Distal-less homeobox 2b.
      
 0.569
H3C791_TETNG
Homeobox A4a.
    
 
 0.551
H3DA82_TETNG
Mesenchyme homeobox 1.
    
 
 0.540
H3DE64_TETNG
NK3 homeobox 2.
    
 
 0.514
H3DK66_TETNG
Distal-less homeobox 5a.
  
   
 0.511
H3CJ55_TETNG
Heart and neural crest derivatives expressed 2.
      
 0.509
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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