Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3C047_TETNGGamma-aminobutyric acid (GABA) A receptor, alpha 5; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (473 aa)    
Predicted Functional Partners:
H3C2W3_TETNG
Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.667
Q4TAK6_TETNG
Chromosome undetermined SCAF7301, whole genome shotgun sequence.
   
 0.667
Q4T234_TETNG
Chromosome undetermined SCAF10357, whole genome shotgun sequence.
   
 0.667
GABRG3
Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.667
GABRG3-2
Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.667
H3CEX6_TETNG
Uncharacterized protein.
   
 0.653
H3CU54_TETNG
Gamma-aminobutyric acid type A receptor beta2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.653
GABRB2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.653
H3CZ78_TETNG
Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.653
H3CZM1_TETNG
Gamma-aminobutyric acid type A receptor beta4 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.653
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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