Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3C054_TETNGF-box domain-containing protein. (422 aa)    
Predicted Functional Partners:
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.910
H3CHN5_TETNG
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.622
H3DP42_TETNG
Histidine triad nucleotide binding protein 3.
    
   0.602
H3CZX0_TETNG
MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.587
H3CA40_TETNG
Cullin 1b; Belongs to the cullin family.
    
 0.586
H3CLX5_TETNG
Cullin-associated and neddylation-dissociated 1.
   
 
  0.581
H3D5M9_TETNG
DCN1-like protein.
     
  0.555
H3CFX5_TETNG
Copper metabolism (Murr1) domain containing 1.
     
  0.524
H3CSL5_TETNG
COMM domain containing 4.
     
  0.524
H3CID9_TETNG
CCHC-type domain-containing protein.
      
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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