Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3C075_TETNGE3 ubiquitin-protein ligase. (884 aa)    
Predicted Functional Partners:
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.851
H3DFR8_TETNG
Spartin b.
    
 
 0.848
TXNIP
Thioredoxin interacting protein.
    
 
 0.826
Q4SK90_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
    
  0.806
H3D0V9_TETNG
Polymerase (RNA) II (DNA directed) polypeptide D.
    
   0.801
H3D204_TETNG
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 
 0.780
H3BXZ7_TETNG
Uncharacterized protein.
 
 
 0.778
H3DG37_TETNG
Poly [ADP-ribose] polymerase.
    
   0.775
H3D1T0_TETNG
WW domain binding protein 2.
    
 
 0.763
UBE2L3
Chromosome undetermined SCAF14638, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.750
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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