Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C076_TETNGUncharacterized protein. (216 aa)    
Predicted Functional Partners:
H3C5Q4_TETNG
RRM domain-containing protein.
   
   0.774
H3CPQ0_TETNG
RRM domain-containing protein.
   
   0.774
H3CB69_TETNG
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.685
H3D386_TETNG
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
 0.664
H3DHM5_TETNG
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
  0.650
H3D9Q4_TETNG
Uncharacterized protein.
   
 
 0.646
H3CH84_TETNG
Spermatid perinuclear RNA binding protein.
    
   0.631
CELF2
Cugbp, Elav-like family member 2.
    
 
 0.627
H3DF04_TETNG
Uncharacterized protein.
    
 
 0.627
H3CC58_TETNG
Aminoadipate aminotransferase.
      
 0.588
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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