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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3C0A3_TETNGREX4 homolog, 3'-5' exonuclease. (369 aa)    
Predicted Functional Partners:
H3DKS7_TETNG
RNA binding motif protein 28.
   
   0.936
H3C498_TETNG
Uncharacterized protein.
   
 0.932
H3CF42_TETNG
RRM domain-containing protein.
   
 0.932
H3DJ12_TETNG
DEAD (Asp-Glu-Ala-Asp) box helicase 24; Belongs to the DEAD box helicase family.
  
 0.901
H3DMJ0_TETNG
Peter pan homolog.
   
   0.890
H3DMJ1_TETNG
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
   
   0.890
H3CI86_TETNG
Ribosomal protein L8.
   
  0.879
H3DCH0_TETNG
NOC2-like nucleolar associated transcriptional repressor.
   
   0.866
H3DFP4_TETNG
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
   0.866
H3DFP5_TETNG
Uncharacterized protein.
   
   0.866
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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