Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
H3C0A6_TETNGFormin binding protein 1b. (623 aa)    
Predicted Functional Partners:
H3DFV8_TETNG
Intersectin 2a.
   
 0.730
H3DK01_TETNG
Uncharacterized protein.
   
 0.730
H3DB04_TETNG
NCK interacting protein with SH3 domain.
    
 
 0.727
H3CI20_TETNG
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.625
H3C779_TETNG
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
   0.598
H3C605_TETNG
Uncharacterized protein.
   
 0.595
H3CYI1_TETNG
WASP like actin nucleation promoting factor a.
   
 0.595
H3DMB2_TETNG
WASP like actin nucleation promoting factor b.
   
 0.595
H3CBE6_TETNG
Zgc:103692.
   
  
 0.579
H3CWV0_TETNG
Uncharacterized protein.
   
 0.551
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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