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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C0B4_TETNGMyosin, light chain 1, alkali; skeletal, fast. (140 aa)    
Predicted Functional Partners:
H3C3Q0_TETNG
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.976
H3C4G7_TETNG
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.976
H3DQX5_TETNG
Si:rp71-17i16.4.
  
 
 
0.969
H3BYR2_TETNG
Troponin T type 2a (cardiac).
   
 0.879
H3CAU9_TETNG
Troponin T type 3a (skeletal, fast).
   
 0.879
H3D0P1_TETNG
Troponin T type 1 (skeletal, slow).
   
 0.879
H3D543_TETNG
Troponin T2c, cardiac.
   
 0.879
TNNT1
Troponin T1, slow skeletal type.
   
 0.879
H3DEZ0_TETNG
Uncharacterized protein.
   
 0.879
H3DN75_TETNG
Uncharacterized protein.
   
 0.879
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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