Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0B5_TETNGCUB domain containing protein 2. (376 aa)    
Predicted Functional Partners:
H3BWA3_TETNG
Uncharacterized protein.
 
      0.869
H3DEJ1_TETNG
Transcobalamin II.
    
 0.501
H3DPV6_TETNG
Legumain.
     
 0.471
H3CFS4_TETNG
Low density lipoprotein receptor-related protein 2a.
   
 0.466
H3DNK6_TETNG
Low density lipoprotein receptor-related protein 2b.
   
 0.466
H3CPF5_TETNG
Macrophage stimulating 1 receptor b.
    
 0.429
H3DB91_TETNG
Macrophage stimulating 1 receptor a.
    
 0.429
H3DF54_TETNG
MET proto-oncogene, receptor tyrosine kinase.
    
 0.429
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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