Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0B9_TETNGUncharacterized protein. (209 aa)    
Predicted Functional Partners:
H3D2Z7_TETNG
La ribonucleoprotein domain family, member 6a.
      
 0.821
H3C6R4_TETNG
Transmembrane protein 230a.
      
 0.820
SLC35A4
Solute carrier family 35 member A4.
   
  
 0.774
H3D292_TETNG
Lysophospholipase like 1.
      
 0.756
H3CFY9_TETNG
Uncharacterized protein.
   
  
 0.691
H3CL24_TETNG
Myb-like, SWIRM and MPN domains 1.
   
 
 0.691
H3D1X5_TETNG
Solute carrier family 35 member A5.
   
  
 0.691
H3CDP3_TETNG
Solute carrier family 35 member B3.
   
  
 0.690
H3DF00_TETNG
Solute carrier family 35 member B4.
   
  
 0.686
H3DBU5_TETNG
Solute carrier family 35 member B1.
   
  
 0.644
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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