Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
H3C0C2_TETNGRas and Rab interactor 2. (885 aa)    
Predicted Functional Partners:
H3CFH1_TETNG
Exonuclease 1.
    
   0.883
H3CZE3_TETNG
Crooked neck pre-mRNA splicing factor 1.
      
 0.667
H3CKI1_TETNG
VPS9 domain-containing protein.
    
 0.603
H3CQK0_TETNG
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.603
H3CTU3_TETNG
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.603
H3DGL0_TETNG
Microcephalin 1.
     
 0.599
H3DE12_TETNG
Centromere protein J.
    
 
 0.591
H3CDS4_TETNG
Uncharacterized protein.
    
 0.588
H3CML4_TETNG
RAB5B, member RAS oncogene family.
    
 0.588
H3CUX2_TETNG
RAB5A, member RAS oncogene family, a.
    
 0.588
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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