Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0C4_TETNGCyclin Dx; Belongs to the cyclin family. (295 aa)    
Predicted Functional Partners:
H3C722_TETNG
Retinoblastoma-like 1 (p107).
    
 0.701
H3D2K0_TETNG
Retinoblastoma 1.
    
 0.701
H3C515_TETNG
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
   
 0.636
H3D8Q3_TETNG
Transcription factor.
   
 0.594
H3C6H8_TETNG
Cyclin-dependent kinase inhibitor 1Bb.
   
 0.584
H3CSR5_TETNG
Cyclin-dependent kinase inhibitor 1Cb.
   
 0.584
H3DAY0_TETNG
Cyclin-dependent kinase inhibitor 1A.
   
 0.584
H3DD39_TETNG
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.576
H3DC90_TETNG
Baculoviral IAP repeat containing 5b.
     
 0.569
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.563
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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