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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0C4_TETNGCyclin Dx; Belongs to the cyclin family. (295 aa)    
Predicted Functional Partners:
H3C722_TETNG
Retinoblastoma-like 1 (p107).
    
 0.710
H3D2K0_TETNG
Retinoblastoma 1.
    
 0.710
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.642
H3C515_TETNG
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
   
 0.635
H3C6H8_TETNG
Cyclin-dependent kinase inhibitor 1Bb.
   
 0.602
H3CSR5_TETNG
Cyclin-dependent kinase inhibitor 1Cb.
   
 0.602
H3DAY0_TETNG
Cyclin-dependent kinase inhibitor 1A.
   
 0.602
H3D8Q3_TETNG
Transcription factor.
   
 0.599
H3CL24_TETNG
Myb-like, SWIRM and MPN domains 1.
    
  0.560
H3DDB5_TETNG
Cyclin H; Belongs to the cyclin family.
    
 0.538
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.