Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0C6_TETNGImmediate early response 3 interacting protein 1. (82 aa)    
Predicted Functional Partners:
Q4RIR8_TETNG
Protein YIPF.
   
 
 0.717
Q4RUP3_TETNG
Protein kish; Involved in the early part of the secretory pathway.
   
 
 0.713
H3CNX0_TETNG
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
  
 0.607
Q4SZ56_TETNG
Protein YIPF.
   
 
 0.591
H3DHN3_TETNG
Serine/arginine repetitive matrix 1.
      
 0.588
H3CVC1_TETNG
Myotubularin related protein 10.
      
 0.576
H3D4A7_TETNG
Protein YIPF.
      
 0.570
H3DBU5_TETNG
Solute carrier family 35 member B1.
      
 0.508
H3DJR5_TETNG
Target of EGR1, exonuclease.
      
 0.501
H3BWP0_TETNG
RNA binding motif protein 4.2.
      
 0.500
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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