Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C0D5_TETNGC2 domain-containing protein. (1372 aa)    
Predicted Functional Partners:
Q4RX10_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence.
    
 0.946
H3C1R3_TETNG
Tectonic family member 1.
    
 0.925
H3CQC7_TETNG
MKS transition zone complex subunit 1.
    
 0.922
H3C2Z5_TETNG
DUF1619 domain-containing protein.
    
 0.911
H3DPP8_TETNG
Abelson helper integration site 1.
    
 0.874
H3DLZ4_TETNG
Transmembrane protein 67.
   
 
 0.866
H3CM39_TETNG
Uncharacterized protein.
    
 
 0.732
H3CTW6_TETNG
Transmembrane protein 231.
    
 
 0.732
H3D878_TETNG
Centrosomal protein 290.
   
 
 0.731
H3CPR7_TETNG
Nephronophthisis 1.
   
  
 0.692
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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