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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0E4_TETNGUncharacterized protein. (838 aa)    
Predicted Functional Partners:
H3CGA7_TETNG
Non-SMC condensin I complex, subunit G.
   
  
 0.842
H3CDT8_TETNG
Si:ch1073-416j23.1.
  
 
 0.836
H3D089_TETNG
Uncharacterized protein.
   
 
 0.799
H3D4Q4_TETNG
Rac GTPase activating protein 1.
   
 
 0.799
H3CN46_TETNG
Ttk protein kinase.
   
  
 0.781
H3DNJ3_TETNG
Centrosomal protein 55 like.
   
 
 0.749
H3D460_TETNG
Abnormal spindle microtubule assembly.
   
 
 0.729
H3C207_TETNG
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.715
Q4RX47_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence.
   
   0.694
H3C4N8_TETNG
Cilia and flagella associated protein 161.
   
    0.691
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.